Literature

HPV

  • Grundhoefer, D., Patterson, B.K. Determination of Liquid-Based Cervical Cytology Specimen Adequacy Using Cellular Light Scatter and Flow Cytometry. Cytometry. 2001; 46: 340-344.
  • Polina, R., Sturgis, C., Patterson, J., Patterson, B.K. Rapid High Throughput Determination of Cervical Cytology Specimen Adequacy Using a Capillary-Based Cytometer. Cytometry. 2008; 74B: 133-136.
  • Kottaridi, C., Georgoulakis, J., Kassanos, D., Pappas, A., Spathis, A., Margari, N., Aninos, D., Karakitsos, P. Use of Flow Cytometry as a Quality Control Device for Liquid-Based Cervical Cytology Specimens. Cytometry. 2010; 78B: 37-40.
  • Narimatsu, R., Patterson, B.K., High-Troughput Cervical Cancer Screening Using Intracellular Human Papillomavirus E6 and E7 mRNA Quantification by Flow Cytometry.  Am J Clin Pathol. 2005; 123: 716-723.
  • Gonzalez S., Henrique A., Sainz de la Cuesta R. The Relation Between The Results of HPV OncoTect, the Cytological Alterations, the Risk Factors and the Viral Genotype Determined by PCR in Pre and Post Menopausic Patients.Ginecologia y Obstetricia Clinica. 2008;9(3):181-186.
  • Coquillard G., Palao, B., Patterson B. Quantification of Intracellular HPV E6/E7 mRNA Expression Increases the Specificity and Positive Predictive Value of Cervical Cancer Screening Compared to HPV DNA. Gynecol Oncol.2011; 120:89-93.
  • Valari, O., Koliopoulos, G., Karakitsos, P., Valasoulis, G., Founta, C., Godevenos, D., Dova, L., Paschopoulos, M., Loufopoulos, A., Paraskevaidis, E. Human Papillomavirus DNA and mRNA Positivity of the Anal Canal in Women With Lower Genital Tract HPV Lesions: Predictors and Clinical Implications. Gynecol Oncol .2011; 122: 505-508.
  • Kottaridi C., Tsiodras S., Spathis A., Chranioti A., Pappas A., Kassanos D., Panayiotides I., Karakitsos P. Clinical Performance of Human Papillomavirus E6, E7 mRNA Flow Cytometric Assay Compared to Human Papillomavirus DNA Typing. Anal Quant Cytol Histol. 2011; 33:305-310.
  • Pierry, D, Weiss G., Lack B., Chen V., Fusco J. Intracellular HPV E6, E7 mRNA Quantification Predicts CIN 2+ in Cervical Biopsies Better Than Papanicolaou Screening for Women Regardless of Age. Arch Pathol Lab Med. 2012;136:956-960.
  • Karakitsos P, Chrelias C, Pouliakis A, Koliopoulos G, Spathis A, Kyrgiou M, Meristoudis C, Chranioti A, Kottaridi C, Valasoulis G, Panayiotides I, Paraskevaidis E. Identification of women for referral to colposcopy by neural networks: a preliminary study based on LBC and molecular biomarkers. J Biomed Biotechnol. 2012; Epub 2012 Oct 3.
  • Spathis A, Kottaridi C, Chranioti A, Meristoudis C, Chrelias C, Panayiotides IG, Paraskevaidis E, Karakitsos P. mRNA and DNA detection of human papillomaviruses in women of all ages attending two colposcopy clinics. PLoS One. 2012;7 Epub 2012 Nov 15.

HIV/AIDS

  • Chargin A, Yin F, Song M, Subramaniam S, Knutson G, Patterson BK. 2015. Identification and characterization of HIV-1 latent viral reservoirs in peripheral blood. J Clin Microbiol 53:000–000. doi:10.1128/JCM.02539–14. Editor: Y.-W. Tang
  • Shults K, Flye-Blakemore L, Patterson BK, Elbeik T. Analysis of Multiple Cell Reservoirs Expressing Unspliced HIV-1 Gag-Pol mRNA In Patients on Antiretroviral Therapy. Future Virology, 2012 Aug;7(8):819-832.
  • Elbeik T, Shults K, Patterson B.K. Simultaneous Ultrasensitive Subpopulation Staining/Hybridization in situ: Multiplex Analyses of Transcriptionally Active HIV-1 Intact Cell Reservoirs. Future Virology. 2012 Aug;7 (8):741-744.
  • Patterson BK. Simultaneous ultrasensitive subpopulation staining/hybridization in situ (SUSHI) in HIV-1 disease monitoring. Methods Mol Biol. 2010;659:337-346.
  • Coquillard G, Patterson BK. Determination of hepatitis C virus-infected, monocyte lineage reservoirs in individuals with or without HIV coinfection. J Infect Dis. 2009 Sep 15;200(6):947-954.
  • Pett SL, McCarthy MC, Cooper DA, MacRae K, Tendolkar A, Norris R, Strizki JM, Williams KM, Emery S. A phase I study to explore the activity and safety of SCH532706, a small molecule chemokine receptor-5 antagonist in HIV type-1-infected patients. Antivir Ther. 2009;14(1):111-115.
  • Briggs RC, Shults KE, Flye LA, McClintock-Treep SA, Jagasia MH, Goodman SA, Boulos FI, Jacobberger JW, Stelzer GT, Head DR. Dysregulated human myeloid nuclear differentiation antigen expression in myelodysplastic syndromes: evidence for a role in apoptosis. Cancer Res. 2006 May 1;66(9):4645-4651.
  • Narimatsu R, Wolday D, Patterson BK. IL-8 increases transmission of HIV type 1 in cervical explant tissue. AIDS Res Hum Retroviruses. 2005 Mar;21(3):228-233.
  • Walter RB, Raden BW, Kamikura DM, Cooper JA, Bernstein ID. Influence of CD33 expression levels and ITIM-dependent internalization on gemtuzumab ozogamicin-induced cytotoxicity. Blood. 2005 Feb 1;105(3):1295-1302.
  • Craigo JK, Patterson BK, Paranjpe S, Kulka K, Ding M, Mellors J, Montelaro RC, Gupta P. Persistent HIV type 1 infection in semen and blood compartments in patients after long-term potent antiretroviral therapy. AIDS Res Hum Retroviruses. 2004 Nov;20(11):1196-1209.
  • Lange CG, Xu Z, Patterson BK, Medvik K, Harnisch B, Asaad R, Valdez H, Lee SJ, Landay A, Lieberman J, Lederman MM. Proliferation responses to HIVp24 during antiretroviral therapy do not reflect improved immune phenotype or function. AIDS. 2004 Mar 5;18(4):605-613.
  • Al-Harthi L, Voris J, Patterson BK, Becker S, Eron J, Smith KY, D’Amico R, Mildvan D, Snidow J, Pobiner B, Yau L, Landay A. Evaluation of the impact of highly active antiretroviral therapy on immune recovery in antiretroviral naive patients. HIV Med. 2004 Jan;5(1):55-65.
  • Jacobberger JW, Sramkoski RM, Frisa PS, Ye PP, Gottlieb MA, Hedley DW, Shankey TV, Smith BL, Paniagua M, Goolsby CL. Immunoreactivity of Stat5 phosphorylated on tyrosine as a cell-based measure of Bcr/Abl kinase activity. Cytometry A. 2003 Aug;54(2):75-88.
  • Song E, Lee SK, Dykxhoorn DM, Novina C, Zhang D, Crawford K, Cerny J, Sharp PA, Lieberman J, Manjunath N, Shankar P. Sustained small interfering RNA-mediated human immunodeficiency virus type 1 inhibition in primary macrophages. J Virol. 2003 Jul;77(13):7174-7181.
  • Paranjpe S, Craigo J, Patterson B, Ding M, Barroso P, Harrison L, Montelaro R, Gupta P.Subcompartmentalization of HIV-1 quasispecies between seminal cells and seminal plasma indicates their origin in distinct genital tissues. AIDS Res Hum Retroviruses. 2002 Nov 20;18(17):1271-1280.
  • Gupta P, Collins KB, Ratner D, Watkins S, Naus GJ, Landers DV, Patterson BK. Memory CD4(+) T cells are the earliest detectable human immunodeficiency virus type 1 (HIV-1)-infected cells in the female genital mucosal tissue during HIV-1 transmission in an organ culture system. J Virol. 2002 Oct;76(19):9868-9876.
  • Patterson BK, Landay A, Siegel JN, Flener Z, Pessis D, Chaviano A, Bailey RC. Susceptibility to human immunodeficiency virus-1 infection of human foreskin and cervical tissue grown in explant culture. Am J Pathol. 2002 Sep;161(3):867-873.
  • Patterson BK, McCallister S, Schutz M, Siegel JN, Shults K, Flener Z, Landay A. Persistence of intracellular HIV-1 mRNA correlates with HIV-1-specific immune responses in infected subjects on stable HAART. AIDS. 2001 Sep 7;15(13):1635-1641.
  • Patterson BK, Behbahani H, Kabat WJ, Sullivan Y, O’Gorman MR, Landay A, Flener Z, Khan N, Yogev R, Andersson J. Leukemia inhibitory factor inhibits HIV-1 replication and is upregulated in placentae from nontransmitting women. J Clin Invest. 2001 Feb;107(3):287-294.
  • Behbahani H, Popek E, Garcia P, Andersson J, Spetz AL, Landay A, Flener Z, Patterson BK. Up-regulation of CCR5 expression in the placenta is associated with human immunodeficiency virus-1 vertical transmission. Am J Pathol. 2000 Dec;157(6):1811-1818.
  • Gupta P, Leroux C, Patterson BK, Kingsley L, Rinaldo C, Ding M, Chen Y, Kulka K, Buchanan W, McKeon B, Montelaro R. Human immunodeficiency virus type 1 shedding pattern in semen correlates with the compartmentalization of viral Quasi species between blood and semen. J Infect Dis. 2000 Jul;182(1):79-87.
  • Collins KB, Patterson BK, Naus GJ, Landers DV, Gupta P. Development of an in vitro organ culture model to study transmission of HIV-1 in the female genital tract. Nat Med. 2000 Apr;6(4):475-479.
  • Patterson BK, Carlo DJ, Kaplan MH, Marecki M, Pawha S, Moss RB. Cell-associated HIV-1 messenger RNA and DNA in T-helper cell and monocytes in asymptomatic HIV-1-infected subjects on HAART plus an inactivated HIV-1 immunogen. AIDS. 1999 Sep 10;13(13):1607-1611.
  • Doherty TM, Chougnet C, Schito M, Patterson BK, Fox C, Shearer GM, Englund G, Sher A. Infection of HIV-1 transgenic mice with Mycobacterium avium induces the expression of infectious virus selectively from a Mac-1-positive host cell population. J Immunol. 1999 Aug 1;163(3):1506-1515.
  • Spetz AL, Patterson BK, Lore K, Andersson J, Holmgren L. Functional gene transfer of HIV DNA by an HIV receptor-independent mechanism. J Immunol. 1999 Jul 15;163(2):736-742.
  • Brodie SJ, Lewinsohn DA, Patterson BK, Jiyamapa D, Krieger J, Corey L, Greenberg PD, Riddell SR. In vivo migration and function of transferred HIV-1-specific cytotoxic T cells. Nat Med. 1999 Jan;5(1):34-41.
  • Patterson BK, Czerniewski MA, Pottage J, Agnoli M, Kessler H, Landay A. Monitoring HIV-1 treatment in immune-cell subsets with ultrasensitive fluorescence-in-situ hybridisation. Lancet. 1999 Jan 16;353(9148):211-212.
  • Yang LP, Riley JL, Carroll RG, June CH, Hoxie J, Patterson BK, Ohshima Y, Hodes RJ, Delespesse G. Productive infection of neonatal CD8+ T lymphocytes by HIV-1. J Exp Med. 1998 Apr 6;187(7):1139-1144.
  • Patterson BK, Mosiman VL, Cantarero L, Furtado M, Bhattacharya M, Goolsby C. Detection of HIV-RNA-positive monocytes in peripheral blood of HIV-positive patients by simultaneous flow cytometric analysis of intracellular HIV RNA and cellular immunophenotype. Cytometry. 1998 Apr 1;31(4):265-274.
  • Patterson BK, Till M, Otto P, Goolsby C, Furtado MR, McBride LJ, Wolinsky SM. Detection of HIV-1 DNA and messenger RNA in individual cells by PCR-driven in situ hybridization and flow cytometry. Science. 1993 May 14;260(5110):976-979.